Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccl3P10855 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl3P10855 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ccl3P10855 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl3P10855 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccl3P10855 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Gm24694-201ENSMUST00000180054 110 ntBASIC13.17□□□□□ -0.3
Ccl3P10855 Gm27663-201ENSMUST00000184839 110 ntBASIC13.17□□□□□ -0.3
Ccl3P10855 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccl3P10855 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccl3P10855 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccl3P10855 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl3P10855 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccl3P10855 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Ccl3P10855 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccl3P10855 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccl3P10855 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccl3P10855 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ccl3P10855 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccl3P10855 Mir1897-201ENSMUST00000122581 272 ntBASIC13.16□□□□□ -0.3
Ccl3P10855 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccl3P10855 Gm9794-201ENSMUST00000202370 423 ntBASIC13.16□□□□□ -0.3
Ccl3P10855 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccl3P10855 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.16□□□□□ -0.3
Ccl3P10855 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccl3P10855 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccl3P10855 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl3P10855 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccl3P10855 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccl3P10855 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl3P10855 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccl3P10855 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccl3P10855 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccl3P10855 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl3P10855 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Ccl3P10855 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccl3P10855 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccl3P10855 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Ccl3P10855 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl3P10855 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms