Protein–RNA interactions for Protein: P01649

Ig kappa chain V-V regions, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01649 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.51□□□□□ -0.41
P01649 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01649 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01649 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P01649 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
P01649 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Rprl2-201ENSMUST00000157150 290 ntBASIC12.5□□□□□ -0.41
P01649 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P01649 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
P01649 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P01649 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.5□□□□□ -0.41
P01649 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.5□□□□□ -0.41
P01649 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.5□□□□□ -0.41
P01649 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.5□□□□□ -0.41
P01649 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01649 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P01649 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
P01649 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
P01649 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P01649 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.49□□□□□ -0.41
P01649 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.49□□□□□ -0.41
P01649 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.49□□□□□ -0.41
P01649 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
P01649 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm18737-201ENSMUST00000173594 937 ntBASIC12.49□□□□□ -0.41
P01649 Gm43575-201ENSMUST00000196420 516 ntBASIC12.49□□□□□ -0.41
P01649 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm18057-201ENSMUST00000208220 503 ntBASIC12.49□□□□□ -0.41
P01649 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.49□□□□□ -0.41
P01649 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
P01649 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
P01649 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.49□□□□□ -0.41
P01649 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P01649 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01649 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.48□□□□□ -0.41
P01649 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P01649 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Gm23935-201ENSMUST00000102303 57 ntBASIC12.48□□□□□ -0.41
P01649 Gm24270-201ENSMUST00000102326 57 ntBASIC12.48□□□□□ -0.41
P01649 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.48□□□□□ -0.41
P01649 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.48□□□□□ -0.41
P01649 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Gm24245-201ENSMUST00000157318 57 ntBASIC12.48□□□□□ -0.41
P01649 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01649 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms