Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.14■□□□□ 0.17
Vti1aO89116 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Gm9385-201ENSMUST00000117563 472 ntBASIC16.14■□□□□ 0.17
Vti1aO89116 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.14■□□□□ 0.17
Vti1aO89116 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.14■□□□□ 0.17
Vti1aO89116 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.14■□□□□ 0.17
Vti1aO89116 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.14■□□□□ 0.17
Vti1aO89116 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.14■□□□□ 0.17
Vti1aO89116 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vti1aO89116 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Vti1aO89116 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vti1aO89116 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.14■□□□□ 0.17
Vti1aO89116 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.14■□□□□ 0.17
Vti1aO89116 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vti1aO89116 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.14■□□□□ 0.17
Vti1aO89116 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vti1aO89116 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.13■□□□□ 0.17
Vti1aO89116 Gm18889-201ENSMUST00000174284 929 ntBASIC16.13■□□□□ 0.17
Vti1aO89116 Gm8318-201ENSMUST00000182954 872 ntBASIC16.13■□□□□ 0.17
Vti1aO89116 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.13■□□□□ 0.17
Vti1aO89116 Gm43474-201ENSMUST00000196415 774 ntBASIC16.13■□□□□ 0.17
Vti1aO89116 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.13■□□□□ 0.17
Vti1aO89116 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.13■□□□□ 0.17
Vti1aO89116 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vti1aO89116 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Vti1aO89116 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.13■□□□□ 0.17
Vti1aO89116 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vti1aO89116 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Vti1aO89116 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vti1aO89116 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.12■□□□□ 0.17
Vti1aO89116 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vti1aO89116 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.12■□□□□ 0.17
Vti1aO89116 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.12■□□□□ 0.17
Vti1aO89116 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.12■□□□□ 0.17
Vti1aO89116 Gm10499-201ENSMUST00000174094 934 ntBASIC16.12■□□□□ 0.17
Vti1aO89116 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.12■□□□□ 0.17
Vti1aO89116 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vti1aO89116 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.12■□□□□ 0.17
Vti1aO89116 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.12■□□□□ 0.17
Vti1aO89116 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vti1aO89116 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vti1aO89116 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Vti1aO89116 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vti1aO89116 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms