Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.38□□□□□ -0.11
Hcn1O88704 AV026068-213ENSMUST00000223675 1171 ntBASIC14.38□□□□□ -0.11
Hcn1O88704 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hcn1O88704 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hcn1O88704 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.38□□□□□ -0.11
Hcn1O88704 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Hcn1O88704 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hcn1O88704 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.37□□□□□ -0.11
Hcn1O88704 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Hcn1O88704 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.37□□□□□ -0.11
Hcn1O88704 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hcn1O88704 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Hcn1O88704 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hcn1O88704 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Hcn1O88704 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hcn1O88704 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hcn1O88704 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn1O88704 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Hcn1O88704 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn1O88704 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Gm15358-201ENSMUST00000119249 520 ntBASIC14.36□□□□□ -0.11
Hcn1O88704 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.36□□□□□ -0.11
Hcn1O88704 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hcn1O88704 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hcn1O88704 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn1O88704 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn1O88704 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn1O88704 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms