Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.83■□□□□ 0.12
Pja1O55176 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.83■□□□□ 0.12
Pja1O55176 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.83■□□□□ 0.12
Pja1O55176 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pja1O55176 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.83■□□□□ 0.12
Pja1O55176 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pja1O55176 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pja1O55176 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pja1O55176 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.83■□□□□ 0.12
Pja1O55176 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.83■□□□□ 0.12
Pja1O55176 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pja1O55176 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.82■□□□□ 0.12
Pja1O55176 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pja1O55176 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.82■□□□□ 0.12
Pja1O55176 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.82■□□□□ 0.12
Pja1O55176 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pja1O55176 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.82■□□□□ 0.12
Pja1O55176 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pja1O55176 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pja1O55176 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pja1O55176 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pja1O55176 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.81■□□□□ 0.12
Pja1O55176 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pja1O55176 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.81■□□□□ 0.12
Pja1O55176 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.81■□□□□ 0.12
Pja1O55176 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.81■□□□□ 0.12
Pja1O55176 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.81■□□□□ 0.12
Pja1O55176 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pja1O55176 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.8■□□□□ 0.12
Pja1O55176 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Pja1O55176 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.8■□□□□ 0.12
Pja1O55176 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.8■□□□□ 0.12
Pja1O55176 Gm18489-201ENSMUST00000172565 551 ntBASIC15.8■□□□□ 0.12
Pja1O55176 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.8■□□□□ 0.12
Pja1O55176 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pja1O55176 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pja1O55176 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pja1O55176 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pja1O55176 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pja1O55176 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pja1O55176 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pja1O55176 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.79■□□□□ 0.12
Pja1O55176 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms