Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpl35aO55142 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpl35aO55142 Dancr-204ENSMUST00000132389 2347 ntBASIC11.18□□□□□ -0.62
Rpl35aO55142 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpl35aO55142 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpl35aO55142 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Rpl35aO55142 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.18□□□□□ -0.62
Rpl35aO55142 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rpl35aO55142 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpl35aO55142 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.17□□□□□ -0.62
Rpl35aO55142 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpl35aO55142 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.17□□□□□ -0.62
Rpl35aO55142 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpl35aO55142 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rpl35aO55142 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.16□□□□□ -0.62
Rpl35aO55142 Gm17271-201ENSMUST00000165535 355 ntBASIC11.16□□□□□ -0.62
Rpl35aO55142 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.16□□□□□ -0.62
Rpl35aO55142 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rpl35aO55142 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.16□□□□□ -0.62
Rpl35aO55142 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.16□□□□□ -0.62
Rpl35aO55142 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.16□□□□□ -0.62
Rpl35aO55142 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl35aO55142 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl35aO55142 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl35aO55142 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms