Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SncaO55042 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Grk6-207ENSMUST00000225925 2769 ntBASIC12.42□□□□□ -0.42
SncaO55042 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.42□□□□□ -0.42
SncaO55042 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SncaO55042 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.42□□□□□ -0.42
SncaO55042 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SncaO55042 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SncaO55042 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.42□□□□□ -0.42
SncaO55042 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.42□□□□□ -0.42
SncaO55042 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.42□□□□□ -0.42
SncaO55042 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.42□□□□□ -0.42
SncaO55042 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.42□□□□□ -0.42
SncaO55042 Gm7506-201ENSMUST00000207758 815 ntBASIC12.42□□□□□ -0.42
SncaO55042 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.42□□□□□ -0.42
SncaO55042 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SncaO55042 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.42□□□□□ -0.42
SncaO55042 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SncaO55042 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SncaO55042 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SncaO55042 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SncaO55042 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
SncaO55042 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.41□□□□□ -0.42
SncaO55042 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SncaO55042 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SncaO55042 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.41□□□□□ -0.42
SncaO55042 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.41□□□□□ -0.42
SncaO55042 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.41□□□□□ -0.42
SncaO55042 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SncaO55042 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SncaO55042 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.4□□□□□ -0.42
SncaO55042 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SncaO55042 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.4□□□□□ -0.42
SncaO55042 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.4□□□□□ -0.42
SncaO55042 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.4□□□□□ -0.42
SncaO55042 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SncaO55042 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.4□□□□□ -0.42
SncaO55042 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SncaO55042 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms