Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cacna1bO55017 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1bO55017 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1bO55017 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.43□□□□□ -0.1
Cacna1bO55017 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.43□□□□□ -0.1
Cacna1bO55017 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1bO55017 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.43□□□□□ -0.1
Cacna1bO55017 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Gm9899-201ENSMUST00000065519 555 ntBASIC14.43□□□□□ -0.1
Cacna1bO55017 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cacna1bO55017 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1bO55017 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.42□□□□□ -0.1
Cacna1bO55017 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.42□□□□□ -0.1
Cacna1bO55017 AY702102-202ENSMUST00000194651 1173 ntBASIC14.42□□□□□ -0.1
Cacna1bO55017 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.42□□□□□ -0.1
Cacna1bO55017 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.42□□□□□ -0.1
Cacna1bO55017 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.42□□□□□ -0.1
Cacna1bO55017 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cacna1bO55017 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1bO55017 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1bO55017 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm23984-201ENSMUST00000157139 203 ntBASIC14.41□□□□□ -0.1
Cacna1bO55017 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1bO55017 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms