Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm25144-201ENSMUST00000179561 110 ntBASIC16.47■□□□□ 0.23
Prom1O54990 Gm25352-201ENSMUST00000179815 110 ntBASIC16.47■□□□□ 0.23
Prom1O54990 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Gm44344-201ENSMUST00000200287 129 ntBASIC16.47■□□□□ 0.23
Prom1O54990 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.47■□□□□ 0.23
Prom1O54990 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.47■□□□□ 0.23
Prom1O54990 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prom1O54990 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.46■□□□□ 0.23
Prom1O54990 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Gm14719-201ENSMUST00000121891 340 ntBASIC16.46■□□□□ 0.23
Prom1O54990 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.46■□□□□ 0.23
Prom1O54990 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prom1O54990 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prom1O54990 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prom1O54990 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prom1O54990 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prom1O54990 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
Prom1O54990 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Prom1O54990 Gm5479-201ENSMUST00000160578 435 ntBASIC16.45■□□□□ 0.22
Prom1O54990 Gm7730-201ENSMUST00000212486 454 ntBASIC16.45■□□□□ 0.22
Prom1O54990 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.45■□□□□ 0.22
Prom1O54990 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.45■□□□□ 0.22
Prom1O54990 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prom1O54990 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Syt7-205ENSMUST00000224135 1557 ntBASIC16.45■□□□□ 0.22
Prom1O54990 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Prom1O54990 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prom1O54990 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prom1O54990 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.44■□□□□ 0.22
Prom1O54990 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.44■□□□□ 0.22
Prom1O54990 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prom1O54990 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.44■□□□□ 0.22
Prom1O54990 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.44■□□□□ 0.22
Prom1O54990 Gm14767-201ENSMUST00000121559 586 ntBASIC16.44■□□□□ 0.22
Prom1O54990 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Prom1O54990 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.44■□□□□ 0.22
Prom1O54990 Shd-206ENSMUST00000225145 998 ntBASIC16.44■□□□□ 0.22
Prom1O54990 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.44■□□□□ 0.22
Prom1O54990 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prom1O54990 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.44■□□□□ 0.22
Prom1O54990 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Prom1O54990 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Prom1O54990 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prom1O54990 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prom1O54990 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms