Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.6□□□□□ -0.23
Rnf13O54965 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rnf13O54965 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf13O54965 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.6□□□□□ -0.23
Rnf13O54965 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Rnf13O54965 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf13O54965 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf13O54965 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf13O54965 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.59□□□□□ -0.23
Rnf13O54965 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.59□□□□□ -0.23
Rnf13O54965 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf13O54965 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf13O54965 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Rnf13O54965 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.58□□□□□ -0.23
Rnf13O54965 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf13O54965 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf13O54965 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf13O54965 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf13O54965 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Gm4459-201ENSMUST00000118750 468 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Gm13836-201ENSMUST00000121159 501 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Gm12497-201ENSMUST00000138778 237 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rnf13O54965 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rnf13O54965 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rnf13O54965 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.58□□□□□ -0.24
Rnf13O54965 Gm8318-201ENSMUST00000182954 872 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Gm27867-201ENSMUST00000184778 125 ntBASIC13.58□□□□□ -0.24
Rnf13O54965 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf13O54965 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf13O54965 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms