Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm2O35900 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm2O35900 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm2O35900 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Lsm2O35900 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lsm2O35900 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
Lsm2O35900 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lsm2O35900 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Gm29257-201ENSMUST00000186115 639 ntBASIC13.35□□□□□ -0.27
Lsm2O35900 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm2O35900 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.35□□□□□ -0.27
Lsm2O35900 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm2O35900 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm2O35900 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.34□□□□□ -0.27
Lsm2O35900 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.34□□□□□ -0.27
Lsm2O35900 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm2O35900 Gm43767-201ENSMUST00000198933 381 ntBASIC13.34□□□□□ -0.27
Lsm2O35900 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.34□□□□□ -0.27
Lsm2O35900 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lsm2O35900 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm2O35900 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lsm2O35900 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm2O35900 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm2O35900 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm2O35900 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm2O35900 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm2O35900 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm2O35900 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm2O35900 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm2O35900 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm2O35900 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm2O35900 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.33□□□□□ -0.28
Lsm2O35900 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm2O35900 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Lsm2O35900 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm2O35900 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm2O35900 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms