Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.96□□□□□ -0.33
Gfra3O35118 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Gm10154-201ENSMUST00000084445 354 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gfra3O35118 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Gfra3O35118 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.96□□□□□ -0.34
Gfra3O35118 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.96□□□□□ -0.34
Gfra3O35118 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.96□□□□□ -0.34
Gfra3O35118 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gfra3O35118 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Gfra3O35118 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gm2272-201ENSMUST00000194903 582 ntBASIC12.95□□□□□ -0.34
Gfra3O35118 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Chchd1-203ENSMUST00000224633 557 ntBASIC12.95□□□□□ -0.34
Gfra3O35118 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.95□□□□□ -0.34
Gfra3O35118 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gfra3O35118 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.95□□□□□ -0.34
Gfra3O35118 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gfra3O35118 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.95□□□□□ -0.34
Gfra3O35118 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gfra3O35118 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.94□□□□□ -0.34
Gfra3O35118 Gm11025-201ENSMUST00000140773 466 ntBASIC12.94□□□□□ -0.34
Gfra3O35118 Gm26308-201ENSMUST00000157768 69 ntBASIC12.94□□□□□ -0.34
Gfra3O35118 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.94□□□□□ -0.34
Gfra3O35118 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.94□□□□□ -0.34
Gfra3O35118 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gfra3O35118 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gfra3O35118 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.94□□□□□ -0.34
Gfra3O35118 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms