Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc2O08811 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ercc2O08811 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.33■□□□□ 0.04
Ercc2O08811 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.33■□□□□ 0.04
Ercc2O08811 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.33■□□□□ 0.04
Ercc2O08811 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.33■□□□□ 0.04
Ercc2O08811 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Ercc2O08811 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ercc2O08811 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.33■□□□□ 0.04
Ercc2O08811 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.33■□□□□ 0.04
Ercc2O08811 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc2O08811 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc2O08811 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.32■□□□□ 0.04
Ercc2O08811 Gm12260-201ENSMUST00000122447 411 ntBASIC15.32■□□□□ 0.04
Ercc2O08811 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Ercc2O08811 Gm6443-201ENSMUST00000203599 874 ntBASIC15.32■□□□□ 0.04
Ercc2O08811 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ercc2O08811 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc2O08811 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc2O08811 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ercc2O08811 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc2O08811 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.31■□□□□ 0.04
Ercc2O08811 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ercc2O08811 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Ercc2O08811 Gm5177-201ENSMUST00000183092 997 ntBASIC15.31■□□□□ 0.04
Ercc2O08811 Gm27525-201ENSMUST00000184465 107 ntBASIC15.31■□□□□ 0.04
Ercc2O08811 Gm17968-201ENSMUST00000194902 784 ntBASIC15.31■□□□□ 0.04
Ercc2O08811 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.31■□□□□ 0.04
Ercc2O08811 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.31■□□□□ 0.04
Ercc2O08811 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.31■□□□□ 0.04
Ercc2O08811 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.31■□□□□ 0.04
Ercc2O08811 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc2O08811 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Gm2272-201ENSMUST00000194903 582 ntBASIC15.3■□□□□ 0.04
Ercc2O08811 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.3■□□□□ 0.04
Ercc2O08811 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ercc2O08811 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.3■□□□□ 0.04
Ercc2O08811 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ercc2O08811 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ercc2O08811 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc2O08811 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ercc2O08811 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ercc2O08811 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc2O08811 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms