Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ebf3O08791 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.57■□□□□ 0.08
Ebf3O08791 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.56■□□□□ 0.08
Ebf3O08791 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ebf3O08791 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ebf3O08791 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.56■□□□□ 0.08
Ebf3O08791 Gm20949-201ENSMUST00000206478 952 ntBASIC15.56■□□□□ 0.08
Ebf3O08791 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.56■□□□□ 0.08
Ebf3O08791 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ebf3O08791 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.56■□□□□ 0.08
Ebf3O08791 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.56■□□□□ 0.08
Ebf3O08791 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ebf3O08791 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Ebf3O08791 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ebf3O08791 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.55■□□□□ 0.08
Ebf3O08791 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ebf3O08791 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.55■□□□□ 0.08
Ebf3O08791 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.55■□□□□ 0.08
Ebf3O08791 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ebf3O08791 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ebf3O08791 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Ebf3O08791 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ebf3O08791 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ebf3O08791 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ebf3O08791 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ebf3O08791 Mir449b-201ENSMUST00000104833 80 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ebf3O08791 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.54■□□□□ 0.08
Ebf3O08791 Gm27321-201ENSMUST00000185021 205 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.54■□□□□ 0.08
Ebf3O08791 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Gm10154-201ENSMUST00000084445 354 ntBASIC15.54■□□□□ 0.08
Ebf3O08791 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.54■□□□□ 0.08
Ebf3O08791 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ebf3O08791 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.54■□□□□ 0.08
Ebf3O08791 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ebf3O08791 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ebf3O08791 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms