Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Dctn1O08788 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Dctn1O08788 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Celf4-206ENSMUST00000224553 1729 ntBASIC18.42■□□□□ 0.54
Dctn1O08788 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.42■□□□□ 0.54
Dctn1O08788 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dctn1O08788 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Dctn1O08788 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Dctn1O08788 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Gm14767-201ENSMUST00000121559 586 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.41■□□□□ 0.54
Dctn1O08788 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Dctn1O08788 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.41■□□□□ 0.54
Dctn1O08788 Gm7730-201ENSMUST00000212486 454 ntBASIC18.41■□□□□ 0.54
Dctn1O08788 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dctn1O08788 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Dctn1O08788 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.4■□□□□ 0.54
Dctn1O08788 Gm13823-201ENSMUST00000119930 345 ntBASIC18.4■□□□□ 0.54
Dctn1O08788 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.4■□□□□ 0.54
Dctn1O08788 Gm43767-201ENSMUST00000198933 381 ntBASIC18.4■□□□□ 0.54
Dctn1O08788 Gm7775-201ENSMUST00000218871 853 ntBASIC18.4■□□□□ 0.54
Dctn1O08788 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.4■□□□□ 0.54
Dctn1O08788 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dctn1O08788 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Dctn1O08788 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Dctn1O08788 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Dctn1O08788 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Dctn1O08788 Dancr-204ENSMUST00000132389 2347 ntBASIC18.39■□□□□ 0.53
Dctn1O08788 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Dctn1O08788 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Gm14719-201ENSMUST00000121891 340 ntBASIC18.39■□□□□ 0.53
Dctn1O08788 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Gm16215-201ENSMUST00000161990 637 ntBASIC18.39■□□□□ 0.53
Dctn1O08788 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Dctn1O08788 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.39■□□□□ 0.53
Dctn1O08788 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.39■□□□□ 0.53
Dctn1O08788 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Dctn1O08788 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Dctn1O08788 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dctn1O08788 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.38■□□□□ 0.53
Dctn1O08788 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Dctn1O08788 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.38■□□□□ 0.53
Dctn1O08788 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Dctn1O08788 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dctn1O08788 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms