Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.22■□□□□ 0.19
Ube3aO08759 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.22■□□□□ 0.19
Ube3aO08759 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.22■□□□□ 0.19
Ube3aO08759 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.22■□□□□ 0.19
Ube3aO08759 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.22■□□□□ 0.19
Ube3aO08759 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.22■□□□□ 0.19
Ube3aO08759 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ube3aO08759 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ube3aO08759 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.22■□□□□ 0.19
Ube3aO08759 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3aO08759 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3aO08759 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3aO08759 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Gm23547-201ENSMUST00000158210 271 ntBASIC16.21■□□□□ 0.19
Ube3aO08759 Gm27742-201ENSMUST00000184667 60 ntBASIC16.21■□□□□ 0.19
Ube3aO08759 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3aO08759 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3aO08759 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3aO08759 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3aO08759 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3aO08759 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3aO08759 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.21■□□□□ 0.18
Ube3aO08759 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ube3aO08759 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ube3aO08759 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ube3aO08759 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Ube3aO08759 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ube3aO08759 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm12497-201ENSMUST00000138778 237 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm28033-201ENSMUST00000184224 96 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm18669-201ENSMUST00000216049 778 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3aO08759 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.2■□□□□ 0.18
Ube3aO08759 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
Ube3aO08759 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.19■□□□□ 0.18
Ube3aO08759 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube3aO08759 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ube3aO08759 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Ube3aO08759 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Ube3aO08759 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ube3aO08759 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ube3aO08759 Gm8318-201ENSMUST00000182954 872 ntBASIC16.19■□□□□ 0.18
Ube3aO08759 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube3aO08759 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3aO08759 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms