Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-3J3QMG8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-3J3QMG8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13d-3J3QMG8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-3J3QMG8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms