Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm28911-201ENSMUST00000188837 117 ntBASIC14.08□□□□□ -0.16
Colca2F8VPY8 Olfr286-202ENSMUST00000205305 969 ntBASIC14.08□□□□□ -0.16
Colca2F8VPY8 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.08□□□□□ -0.16
Colca2F8VPY8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 BC001981-202ENSMUST00000191393 1545 ntBASIC14.07□□□□□ -0.16
Colca2F8VPY8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Gm6916-202ENSMUST00000205523 195 ntBASIC14.07□□□□□ -0.16
Colca2F8VPY8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Colca2F8VPY8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Gm4984-201ENSMUST00000115987 360 ntBASIC14.06□□□□□ -0.16
Colca2F8VPY8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Gm15678-201ENSMUST00000117573 960 ntBASIC14.06□□□□□ -0.16
Colca2F8VPY8 Gm15393-201ENSMUST00000120499 219 ntBASIC14.06□□□□□ -0.16
Colca2F8VPY8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Colca2F8VPY8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Gm12341-201ENSMUST00000119724 503 ntBASIC14.05□□□□□ -0.16
Colca2F8VPY8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Gm33320-201ENSMUST00000192232 530 ntBASIC14.05□□□□□ -0.16
Colca2F8VPY8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.05□□□□□ -0.16
Colca2F8VPY8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.05□□□□□ -0.16
Colca2F8VPY8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Colca2F8VPY8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Colca2F8VPY8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms