Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh1F7BJK1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Gm7284-201ENSMUST00000131667 944 ntBASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh1F7BJK1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Gm7506-201ENSMUST00000207758 815 ntBASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh1F7BJK1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh1F7BJK1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms