Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Carlr-201ENSMUST00000181515 2574 ntBASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Gm13597-201ENSMUST00000121239 375 ntBASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Gm11594-201ENSMUST00000122313 162 ntBASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh11xF6ZNL5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gm12008-201ENSMUST00000117791 755 ntBASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gm12134-201ENSMUST00000122109 520 ntBASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh11xF6ZNL5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Gm2756-201ENSMUST00000195851 400 ntBASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh11xF6ZNL5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdh11xF6ZNL5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh11xF6ZNL5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh11xF6ZNL5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh11xF6ZNL5 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.51■□□□□ 0.23
Pcdh11xF6ZNL5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh11xF6ZNL5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms