Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Gm45747-201ENSMUST00000212203 999 ntBASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4lE9Q2N0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm15467-201ENSMUST00000120582 445 ntBASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm43514-201ENSMUST00000198852 424 ntBASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4lE9Q2N0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4lE9Q2N0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms