Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Gm11127A7VMS2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Gm6257-201ENSMUST00000163864 910 ntBASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm11127A7VMS2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm11127A7VMS2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.28□□□□□ -0.28
Gm11127A7VMS2 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm11127A7VMS2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms