Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm14767-201ENSMUST00000121559 586 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm9908-201ENSMUST00000211534 448 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm6180-201ENSMUST00000065243 498 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a4A2AX52 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.61□□□□□ -0.39
Col6a4A2AX52 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col6a4A2AX52 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a4A2AX52 Gm45384-201ENSMUST00000210451 277 ntBASIC12.61□□□□□ -0.39
Col6a4A2AX52 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms