Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 AC153872.1-201ENSMUST00000199539 128 ntBASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Trav13-3-201ENSMUST00000117226 336 ntBASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Gm43133-201ENSMUST00000197472 463 ntBASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Gm44207-201ENSMUST00000204568 1424 ntBASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom2A2ALU4 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Gm17795-201ENSMUST00000214505 757 ntBASIC23.18■■□□□ 1.3
Shroom2A2ALU4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom2A2ALU4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm22334-201ENSMUST00000158070 133 ntBASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm45865-201ENSMUST00000211815 945 ntBASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm26596-201ENSMUST00000180464 2655 ntBASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm7895-201ENSMUST00000187459 1173 ntBASIC23.17■■□□□ 1.3
Shroom2A2ALU4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm43947-201ENSMUST00000203019 959 ntBASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC23.17■■□□□ 1.3
Shroom2A2ALU4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Gm16505-201ENSMUST00000179981 232 ntBASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Gm43830-201ENSMUST00000198760 1067 ntBASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Olfr284-202ENSMUST00000206647 966 ntBASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom2A2ALU4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Gm11803-201ENSMUST00000119966 444 ntBASIC23.15■■□□□ 1.3
Shroom2A2ALU4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Gm42690-201ENSMUST00000197921 1836 ntBASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom2A2ALU4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Shroom2A2ALU4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Shroom2A2ALU4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Shroom2A2ALU4 Tcf21-202ENSMUST00000218002 1788 ntBASIC23.14■■□□□ 1.3
Shroom2A2ALU4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Shroom2A2ALU4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
Shroom2A2ALU4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC23.14■■□□□ 1.29
Shroom2A2ALU4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Shroom2A2ALU4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Gm12846-201ENSMUST00000120431 1373 ntBASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom2A2ALU4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms