Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 AA414768-201ENSMUST00000121924 1257 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm25745-201ENSMUST00000174945 133 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mir3081-201ENSMUST00000175305 84 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Olfr129-201ENSMUST00000122318 993 ntBASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms