Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm10175-201ENSMUST00000086013 645 ntBASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm14494-201ENSMUST00000118786 435 ntBASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm6443-201ENSMUST00000203599 874 ntBASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm15467-201ENSMUST00000120582 445 ntBASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Mir8117-201ENSMUST00000184773 107 ntBASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Atg4a-psA0A0G2JFS9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms