Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm4899-201ENSMUST00000178708 719 ntBASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.88□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm6736-201ENSMUST00000166583 948 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms