Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ighv1-47A0A0A6YY41 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ighv1-47A0A0A6YY41 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ighv1-47A0A0A6YY41 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ighv1-47A0A0A6YY41 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ighv1-47A0A0A6YY41 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ighv1-47A0A0A6YY41 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.4□□□□□ -0.43
Ighv1-47A0A0A6YY41 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm13418-201ENSMUST00000119097 944 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44357-201ENSMUST00000195897 142 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm19658-201ENSMUST00000196231 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44367-201ENSMUST00000196836 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44350-201ENSMUST00000197197 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44390-201ENSMUST00000197533 144 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44313-201ENSMUST00000198018 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44486-201ENSMUST00000198508 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44314-201ENSMUST00000199263 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44394-201ENSMUST00000199558 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44484-201ENSMUST00000199873 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44466-201ENSMUST00000200264 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44359-201ENSMUST00000200671 138 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm27646-201ENSMUST00000183989 110 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-47A0A0A6YY41 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms