Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm43767-201ENSMUST00000198933 381 ntBASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm18622-201ENSMUST00000219361 595 ntBASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Rprl3-201ENSMUST00000157400 290 ntBASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm43799-201ENSMUST00000201845 579 ntBASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm18032-201ENSMUST00000222541 538 ntBASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-5A0A075B6B9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-5A0A075B6B9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6d-5A0A075B6B9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav6d-5A0A075B6B9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6d-5A0A075B6B9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm44454-201ENSMUST00000198541 138 ntBASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm45328-201ENSMUST00000210942 917 ntBASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-5A0A075B6B9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms