Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44357-201ENSMUST00000195897 142 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm19658-201ENSMUST00000196231 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44367-201ENSMUST00000196836 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44350-201ENSMUST00000197197 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44390-201ENSMUST00000197533 144 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44313-201ENSMUST00000198018 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44486-201ENSMUST00000198508 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44314-201ENSMUST00000199263 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44394-201ENSMUST00000199558 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44484-201ENSMUST00000199873 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44466-201ENSMUST00000200264 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm44359-201ENSMUST00000200671 138 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm18206-201ENSMUST00000207027 926 ntBASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6d-7A0A075B6B0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm4459-201ENSMUST00000118750 468 ntBASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm25406-201ENSMUST00000157599 105 ntBASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Mir5131-201ENSMUST00000175426 93 ntBASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-7A0A075B6B0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms