Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9d-1A0A075B699 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm15358-201ENSMUST00000119249 520 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm8318-201ENSMUST00000182954 872 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-1A0A075B699 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav9d-1A0A075B699 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.56□□□□□ -0.56
Trav9d-1A0A075B699 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms