Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.92□□□□□ -0.5
Trav17A0A075B655 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav17A0A075B655 Celf4-206ENSMUST00000224553 1729 ntBASIC11.91□□□□□ -0.5
Trav17A0A075B655 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Gm15794-201ENSMUST00000120182 631 ntBASIC11.91□□□□□ -0.5
Trav17A0A075B655 Gm17808-201ENSMUST00000200859 894 ntBASIC11.91□□□□□ -0.5
Trav17A0A075B655 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav17A0A075B655 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav17A0A075B655 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.91□□□□□ -0.5
Trav17A0A075B655 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Mir3081-201ENSMUST00000175305 84 ntBASIC11.9□□□□□ -0.5
Trav17A0A075B655 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.9□□□□□ -0.5
Trav17A0A075B655 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Gm18622-201ENSMUST00000219361 595 ntBASIC11.9□□□□□ -0.5
Trav17A0A075B655 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav17A0A075B655 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms