Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm9719-201ENSMUST00000162765 543 ntBASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm43438-201ENSMUST00000198133 379 ntBASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm7775-201ENSMUST00000218871 853 ntBASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8n-2A0A075B633 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8n-2A0A075B633 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Gm5566-201ENSMUST00000116118 459 ntBASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Gm28631-201ENSMUST00000190740 334 ntBASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8n-2A0A075B633 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8n-2A0A075B633 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms