Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav10nA0A075B622 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav10nA0A075B622 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm12350-201ENSMUST00000121208 462 ntBASIC13.3□□□□□ -0.28
Trav10nA0A075B622 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.3□□□□□ -0.28
Trav10nA0A075B622 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav10nA0A075B622 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Gm18733-201ENSMUST00000173950 856 ntBASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Gm18246-201ENSMUST00000221023 728 ntBASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav10nA0A075B622 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav10nA0A075B622 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms