Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Gm11336-201ENSMUST00000118168 334 ntBASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Carlr-201ENSMUST00000181515 2574 ntBASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav4n-4A0A075B615 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav4n-4A0A075B615 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav4n-4A0A075B615 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms