Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gm11780-201ENSMUST00000136880 516 ntBASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gm10499-201ENSMUST00000174094 934 ntBASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9-1A0A075B601 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9-1A0A075B601 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Celf4-206ENSMUST00000224553 1729 ntBASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms