Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm27742-201ENSMUST00000184667 60 ntBASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm7506-201ENSMUST00000207758 815 ntBASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-1A0A075B5Z8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm15372-201ENSMUST00000120729 834 ntBASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-1A0A075B5Z8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-1A0A075B5Z8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms