Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ighv1-55A0A075B5W6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ighv1-55A0A075B5W6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Efs-202ENSMUST00000227037 2540 ntBASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ighv1-55A0A075B5W6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ighv1-55A0A075B5W6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms