Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
H2afb2S4R1M3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.02■□□□□ -0
H2afb2S4R1M3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.02■□□□□ -0
H2afb2S4R1M3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.02■□□□□ -0
H2afb2S4R1M3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.02■□□□□ -0
H2afb2S4R1M3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb2S4R1M3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afb2S4R1M3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afb2S4R1M3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.02□□□□□ -0.01
H2afb2S4R1M3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afb2S4R1M3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15□□□□□ -0.01
H2afb2S4R1M3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Gm27628-201ENSMUST00000184911 107 ntBASIC15□□□□□ -0.01
H2afb2S4R1M3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15□□□□□ -0.01
H2afb2S4R1M3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15□□□□□ -0.01
H2afb2S4R1M3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb2S4R1M3 Gm37305-201ENSMUST00000195714 4279 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms