Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.07□□□□□ -0.16
Cldn6Q9Z262 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.06□□□□□ -0.16
Cldn6Q9Z262 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn6Q9Z262 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm12350-201ENSMUST00000121208 462 ntBASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.05□□□□□ -0.16
Cldn6Q9Z262 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm27741-201ENSMUST00000185060 237 ntBASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn6Q9Z262 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn6Q9Z262 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn6Q9Z262 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn6Q9Z262 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms