Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm11745-201ENSMUST00000121669 448 ntBASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm44335-201ENSMUST00000196879 141 ntBASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm44297-201ENSMUST00000198304 141 ntBASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm44346-201ENSMUST00000198851 141 ntBASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm5312-201ENSMUST00000203728 547 ntBASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx9Q9WUH2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Rprl2-201ENSMUST00000157150 290 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Efs-202ENSMUST00000227037 2540 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lhx9Q9WUH2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx9Q9WUH2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx9Q9WUH2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms