Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm27618-201ENSMUST00000183671 60 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Mir8102-201ENSMUST00000184148 139 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm18057-201ENSMUST00000208220 503 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm18246-201ENSMUST00000221023 728 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col13a1Q9R1N9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col13a1Q9R1N9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col13a1Q9R1N9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.77□□□□□ -0.37
Col13a1Q9R1N9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms