Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Gm10275-202ENSMUST00000168697 495 ntBASIC17.58■□□□□ 0.41
Scn11aQ9R053 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.58■□□□□ 0.41
Scn11aQ9R053 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Mir125a-201ENSMUST00000083545 68 ntBASIC17.58■□□□□ 0.41
Scn11aQ9R053 Gm10275-201ENSMUST00000092620 635 ntBASIC17.58■□□□□ 0.41
Scn11aQ9R053 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn11aQ9R053 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Scn11aQ9R053 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn11aQ9R053 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn11aQ9R053 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm9182-201ENSMUST00000217829 639 ntBASIC17.56■□□□□ 0.4
Scn11aQ9R053 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.56■□□□□ 0.4
Scn11aQ9R053 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn11aQ9R053 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.56■□□□□ 0.4
Scn11aQ9R053 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn11aQ9R053 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn11aQ9R053 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Gm29667-201ENSMUST00000190817 490 ntBASIC17.55■□□□□ 0.4
Scn11aQ9R053 AY702102-202ENSMUST00000194651 1173 ntBASIC17.55■□□□□ 0.4
Scn11aQ9R053 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.55■□□□□ 0.4
Scn11aQ9R053 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn11aQ9R053 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms