Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a2Q9JLR1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sec61a2Q9JLR1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm6089-201ENSMUST00000197666 938 ntBASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a2Q9JLR1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sec61a2Q9JLR1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Gm2651-201ENSMUST00000203560 838 ntBASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.52□□□□□ -0.25
Sec61a2Q9JLR1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Gm18195-201ENSMUST00000207604 706 ntBASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a2Q9JLR1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms