Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm25086-201ENSMUST00000179931 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm23243-201ENSMUST00000180047 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24659-201ENSMUST00000180212 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24169-201ENSMUST00000180244 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm23689-201ENSMUST00000180354 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm27359-201ENSMUST00000184153 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm27785-201ENSMUST00000184268 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm27466-201ENSMUST00000184396 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm27703-201ENSMUST00000184836 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3bQ9ES34 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Gm13464-201ENSMUST00000119418 935 ntBASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3bQ9ES34 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.78■□□□□ 0.44
Ube3bQ9ES34 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3bQ9ES34 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Gm8749-201ENSMUST00000117737 331 ntBASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.77■□□□□ 0.44
Ube3bQ9ES34 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms