Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim54Q9ERP3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim54Q9ERP3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.23■□□□□ 0.19
Trim54Q9ERP3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Gm27430-201ENSMUST00000184585 107 ntBASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Gm44333-201ENSMUST00000197168 107 ntBASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim54Q9ERP3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Gm25287-201ENSMUST00000103846 110 ntBASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Gm22918-201ENSMUST00000103855 110 ntBASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim54Q9ERP3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Gm15483-201ENSMUST00000120338 456 ntBASIC16.21■□□□□ 0.19
Trim54Q9ERP3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms