Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gm13216-201ENSMUST00000117145 591 ntBASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-4Q9EQM3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Gm6222-201ENSMUST00000120787 396 ntBASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Gm27892-201ENSMUST00000185017 106 ntBASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-4Q9EQM3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Gm4984-201ENSMUST00000115987 360 ntBASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-4Q9EQM3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm27631-201ENSMUST00000184163 466 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.28■□□□□ 0.04
Nkx2-4Q9EQM3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms