Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Gm23935-201ENSMUST00000102303 57 ntBASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Gm24270-201ENSMUST00000102326 57 ntBASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Gm24245-201ENSMUST00000157318 57 ntBASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Gm17271-201ENSMUST00000165535 355 ntBASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdc40Q9DC48 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdc40Q9DC48 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gm4899-201ENSMUST00000178708 719 ntBASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.95□□□□□ -0.18
Cdc40Q9DC48 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdc40Q9DC48 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Mir8117-201ENSMUST00000184773 107 ntBASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdc40Q9DC48 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms