Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Asic1-205ENSMUST00000228185 1818 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Gm13597-201ENSMUST00000121239 375 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Gm9727-201ENSMUST00000161387 555 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2aQ9DB34 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2aQ9DB34 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm11779-201ENSMUST00000118541 368 ntBASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2aQ9DB34 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms