Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
U2af1Q9D883 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
U2af1Q9D883 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.71■□□□□ 0.75
U2af1Q9D883 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.71■□□□□ 0.75
U2af1Q9D883 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.71■□□□□ 0.75
U2af1Q9D883 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.71■□□□□ 0.75
U2af1Q9D883 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
U2af1Q9D883 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2af1Q9D883 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.71■□□□□ 0.75
U2af1Q9D883 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.7■□□□□ 0.74
U2af1Q9D883 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.7■□□□□ 0.74
U2af1Q9D883 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.7■□□□□ 0.74
U2af1Q9D883 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2af1Q9D883 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
U2af1Q9D883 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
U2af1Q9D883 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2af1Q9D883 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2af1Q9D883 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
U2af1Q9D883 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms